Protein Info for Dsui_0787 in Dechlorosoma suillum PS

Annotation: putative membrane protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 148 signal peptide" amino acids 17 to 17 (1 residues), see Phobius details transmembrane" amino acids 18 to 35 (18 residues), see Phobius details amino acids 43 to 65 (23 residues), see Phobius details amino acids 86 to 107 (22 residues), see Phobius details amino acids 113 to 135 (23 residues), see Phobius details PF05232: BTP" amino acids 8 to 70 (63 residues), 62.9 bits, see alignment E=1.1e-21 amino acids 80 to 142 (63 residues), 79.7 bits, see alignment E=6.3e-27

Best Hits

KEGG orthology group: None (inferred from 63% identity to tmz:Tmz1t_0636)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QHP3 at UniProt or InterPro

Protein Sequence (148 amino acids)

>Dsui_0787 putative membrane protein (Dechlorosoma suillum PS)
MSHGVPLRSFKDRLRQVALFELLGLLLITPGFAWVSGQSMESALGLLAVLSLMAALWNGG
YNTAVDWLQAHHFGTRADQRGWRGRILHALCFEGGLLLLTLPVIVLWTGLSWWAALVADL
GLALVYTAYAFVFNLAYDRLFPIVPPPA