Protein Info for Dsui_0729 in Dechlorosoma suillum PS

Annotation: putative autotransporter protein,putative Ig domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1590 signal peptide" amino acids 1 to 37 (37 residues), see Phobius details PF05345: He_PIG" amino acids 191 to 276 (86 residues), 65 bits, see alignment 2.1e-21 amino acids 280 to 360 (81 residues), 40.3 bits, see alignment 1e-13 amino acids 376 to 460 (85 residues), 39.6 bits, see alignment 1.7e-13 amino acids 474 to 554 (81 residues), 54.9 bits, see alignment 3.1e-18 PF17963: Big_9" amino acids 548 to 629 (82 residues), 42.6 bits, see alignment 2.4e-14 amino acids 634 to 716 (83 residues), 48.1 bits, see alignment 4.9e-16 amino acids 721 to 803 (83 residues), 44.8 bits, see alignment 5.1e-15 amino acids 808 to 890 (83 residues), 44.3 bits, see alignment 7.4e-15 amino acids 895 to 977 (83 residues), 47.1 bits, see alignment 9.8e-16 amino acids 982 to 1064 (83 residues), 46.3 bits, see alignment 1.7e-15 amino acids 1069 to 1151 (83 residues), 51.8 bits, see alignment 3.2e-17 PF03797: Autotransporter" amino acids 1322 to 1569 (248 residues), 147.1 bits, see alignment E=2.6e-46

Best Hits

Predicted SEED Role

"Fibronectin type III domain protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QH46 at UniProt or InterPro

Protein Sequence (1590 amino acids)

>Dsui_0729 putative autotransporter protein,putative Ig domain-containing protein (Dechlorosoma suillum PS)
MKPNCLNPLFSSLVAGLRLFRGLLLLLLALALPAYGTINGGTIDFGAANTHSTYSDVSSD
YNGLRFTGQWLYYIYDDLNTVATNRSGDAITSTSTGGDAIIKSANGTDRFNITSVKILAY
GVGMTSFTFTGYRNSVAGPTETVNVTPGNTFVLHNLSNMTNVDEVRVTNNSATEPFNFAF
DDLTVAAYSAPLSLSPASLTNPTVGSTYSQTISASGGNGTYSYAVTTGSLPAGLSLNAST
GALTGTPTAGGAFNFTITATDTASATGSKAYSVTVAAPTISFSPTTLTAGTVGSAYSQSI
SGSGGTAPYGSYIVKTGALPAGLSLSSGGVVSGTPTAGGTFTFTVQGTDSSTGSGPYSAT
SSTISLTIGAPTLSFTPTSLTGGTVGVAYSQSLSGSGGTAPYGSFTLASGSLPPGLSLGS
GGTVSGTPTAAGTYTFTVSAQDSSTGSGPYSGTSSTISLTIGAPTLSLSPAAGALTAASR
GSAYSQTFSTSGGTSPYTYSITAGSLPAGLTLSSGGVLSGTPTVEGNFSFTVTATDSSGG
TQYSTSQAYTLTVNPPLPVANAVSATVAYNSSNNAITLNITGGAATSVTVASAASHGTAT
ASGTSITYTPTAGYSGSDSFTYTATNASGTSAPATVSITVNPQAPVANAVSATVAYNSSN
NAITLNITGGAATSVAVASAASHGTATASGTSITYTPTPGYVGSDSFTYTATNATGTSAA
ATVTITVNPLAPVANAVSATVAYNSSNNAITLNITGGVATSVAVASGASHGTATASGTSI
TYSPTAGYSGSDSFTYTATNATGTSAAATVSITVNPQAPVANAVSLTVSYNSAANPVTLN
ITGGAATSVAVAGAASHGVATASGTSITYTPTSGYSGSDSFTYTATNAGGTSAAATVSIT
VNPQAPVANAVSVTVAFNSSNNAIPLSISGGAATSVAVASGASHGTATASGTSITYTPTV
GYTGSDSFTYTATNATGTSAAATVTITVSAAAPVANAVSATVAFNSGANPIALNITGGVA
TSVSVATAAAHGTATASGTSITYTPHTGYSGSDSFTYRATNATGTSAPATVTITVNPAAP
VAGAVTVTVPINSSNNPIPLNVSGGAATTVTVVTAPGHGTATASGASITYTPTAGYSGSD
SFTYTATNATGTSAPATVTISVMTRPDPSKDANVVGIIGAQAEVAKRFSLTQISNFQSRL
ENLHVRLRPERPRGFDSPNARRPSVMPALAVVGNNSGSSAGNIDQNGGFGLATGTAVTNL
GSRDAATGTGGVVTAGPAPGQESGFNPFAALSTLGQMANSHGLPTLNISSKASNFQDTGF
DVWSAGNVSFGRLDDADAKFTTSGISFGTDSRFGDNLILGLGVGFGHERQKIGNDGTRNV
GDDYSVIVYGSYQPVPGTFIDGLIGMGRLDLESRRYSAAAGAFATSQRTGKQWFASLSAA
YEFQQDAHILSPYGRIDIASTRLDAAVESGAGIYNLAYFSQKAPVTKLSFGLRGETSVEL
ETTLARPYFRVEYQHDFENPEGARMAYADDLSGPSYQIAATTLKRDTMVFGLGSDFVFKS
AWTLGLRYQYSNNSGAMTMHTLGLQIHKSF