Protein Info for Dsui_0723 in Dechlorosoma suillum PS

Annotation: chemotaxis signal transduction protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 885 PF01584: CheW" amino acids 713 to 853 (141 residues), 77.5 bits, see alignment E=7.9e-26

Best Hits

Predicted SEED Role

"FIG00537670: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QH40 at UniProt or InterPro

Protein Sequence (885 amino acids)

>Dsui_0723 chemotaxis signal transduction protein (Dechlorosoma suillum PS)
MHDDNQGLVEAFIPFMRSVAQCEKQLENLNFTWGMIEATAKMNCPAEAKTILPTMGATRE
GFGRLERQLIENLVQENIRKVVLEIGSKAQVAVDILIRNLYERTADVGFLATDEDIRDFI
RQRKEAPDQETLEGEKARILRRLQEYRDKYTVYDEILVLDLNGRVIAHLDGASPVLFSQD
PLLQQTLHTDGYVETFRASDLRPGLERALIYSQRIDDGDSGEPLGVLCLCFRFADETESI
FRNLRRREDRSVMLLLDAQGTVIASSDADHVPLGRRLEQVRDADYRIVDWGGREYLARTC
PTRGYQGYVGPGWVGHVMVPVSSAFRAGLGQAAESLPAEVLEGVLAHADTFCPALADIAR
GAEGINLSLRRVVWNGQIMAADKRGDLLKLKSVLQQISETGDRTSDLFARSIADLYQTAI
SSSLQDVQFISRLMIDIMDRNLYERANDCRWWALTSALRRSMAAGRPGEAEAQAMAGILE
YINSLYTVYSRLFVYDLSGTIVAASNLHGDSLNLVGKKVDAGWVQSVFYLPSTQHYCVSP
FEKSWLYGGRPTYVYNAAIRHPDDPAKVVGGIGIVFDAAPQFAAMLADSLPPQAGAFAVF
AERSGRIIASSDERFPAESLLEVDKSLFAAANGEGRSRVVQLAGRTWIVGSTASFGYREF
KNSGDYSNDVVALVFVPVGDGSAAAAPRERRPAVLEGSYGDLHARGGQSVELATFVVGDK
VYGLPAAEVLEAVDPARLSPMSGSRRYLCGVISFQSGGGDSGTLVPVVDMRFLLNYPAKE
VDNHSQIVVVRVRDGLMGLLVDDLYAVPEFDAERLEPIPEMIRQDAGYVQAIIKPRQPDR
EKILQVLDPERICGAAQRKPESAAGGEVPRPAAPLRAIGGPGGGR