Protein Info for Dsui_0714 in Dechlorosoma suillum PS

Annotation: 6,7-dimethyl-8-ribityllumazine synthase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 157 PF00885: DMRL_synthase" amino acids 18 to 153 (136 residues), 166.8 bits, see alignment E=1.3e-53 TIGR00114: 6,7-dimethyl-8-ribityllumazine synthase" amino acids 19 to 151 (133 residues), 136.5 bits, see alignment E=3.1e-44

Best Hits

Swiss-Prot: 73% identical to RISB_AZOSB: 6,7-dimethyl-8-ribityllumazine synthase (ribH) from Azoarcus sp. (strain BH72)

KEGG orthology group: K00794, 6,7-dimethyl-8-ribityllumazine synthase [EC: 2.5.1.78] (inferred from 77% identity to dar:Daro_3738)

MetaCyc: 48% identical to 6,7-dimethyl-8-ribityllumazine synthase monomer (Bacillus subtilis)
LUMAZINESYN-RXN [EC: 2.5.1.78]

Predicted SEED Role

"6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)" (EC 2.5.1.78)

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.5.1.78

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QH31 at UniProt or InterPro

Protein Sequence (157 amino acids)

>Dsui_0714 6,7-dimethyl-8-ribityllumazine synthase (Dechlorosoma suillum PS)
MARYDNIPEHDINLNGAGLKVGIVMARFTLDVCEGLLSACTAELQRLGVAAGDITIATVP
GALEIPLVLQTMAQTGKYDALVALGAVIRGETYHFEVVSNDSCRGVLEVQLKTGVPIANG
ILTTENDDQALVRMQVKGADCAQAAVEMANLLKAVGK