Protein Info for Dsui_0439 in Dechlorosoma suillum PS
Annotation: 2-nitropropane dioxygenase-like enzyme
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
KEGG orthology group: K00459, nitronate monooxygenase [EC: 1.13.12.16] (inferred from 68% identity to azo:azo3821)Predicted SEED Role
No annotation
MetaCyc Pathways
- alkylnitronates degradation (2/2 steps found)
KEGG Metabolic Maps
Isozymes
Compare fitness of predicted isozymes for: 1.13.12.16
Use Curated BLAST to search for 1.13.12.16
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See G8QPJ7 at UniProt or InterPro
Protein Sequence (315 amino acids)
>Dsui_0439 2-nitropropane dioxygenase-like enzyme (Dechlorosoma suillum PS) MPVPALFQGRMAVPAIAAPMFLVSGPDLVINACKAGIAASFPSLNARPASQLDEWLTRMN KELGPKDAPFGINLILHHSNTRLEEDVALVVKHKVPFVITSLGNPSKLVEVVHGYGGLVF SDVIHAYHAKKAIEAGVDGIIAVSAGAGGHAGTQNPFALLREIREFWDGVLILGGAISDG ASIRAAEIAGADFAYMGTRLIATQESMAQQAYKDMLVSAGPRDIVYTDAVSGTNANFIWQ SLEKAGYTKESLAAGGQANHNYGGDEAKAWRDVWSAGHGVANIHDVPTVAELAARLAAEY RQACQRQPSQALRPV