Protein Info for Dsui_0379 in Dechlorosoma suillum PS

Annotation: indolepyruvate ferredoxin oxidreductase, alpha/beta subunit

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1183 transmembrane" amino acids 743 to 764 (22 residues), see Phobius details PF01558: POR" amino acids 749 to 936 (188 residues), 68.7 bits, see alignment E=1.1e-22 PF20169: DUF6537" amino acids 964 to 1168 (205 residues), 215.5 bits, see alignment E=1.2e-67

Best Hits

Predicted SEED Role

"Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits" in subsystem Aromatic amino acid interconversions with aryl acids

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QNZ4 at UniProt or InterPro

Protein Sequence (1183 amino acids)

>Dsui_0379 indolepyruvate ferredoxin oxidreductase, alpha/beta subunit (Dechlorosoma suillum PS)
MSDLSLHVPKELASASLDDKYTTLSGRAFLTGTQALIRLPMLQRLRDQAQGLNTAGFISG
YRGSPLGGLDQGLWKAQKYLAENHITFQPGVNEDLAATAVWGSQQVNLFPGAKYDGVFAL
WYGKGPGVDRSGDVFRHANAAGSSRHGGVLVVAGDDHAAKSSTLPHQTEHVFKAVMMPVL
YPANVQEYLEYGLHGWAMSRYSGCWVAFKALADTVETSASVWVDPMALDIRLPDDFELPA
DGLNIRWPDPPLVQEARLTHFKLYAALAYARANRLNRIVIDSPAPRLGIITAGKSYLDVM
QALDELGIDQQLAAQIGIRLYKVGMVWPLESEGVRQFAEGLDEILVVEEKRQMLEYQLKE
ELYNWREDVRPRVVGKFDEKGEWALLPDGKGHLAHGDWLLPAAGELSVAQIARAIASRIE
RHFTSPAIKARLDLIEAKQKALQTPLILTQRTPHFCSGCPHNTSTRVPEGSRAVAGIGCH
YMVTWMDRSTSTFTHMGGEGVTWVGQAPFTEEKHIFANLGDGTYFHSGLLAIRQSVAAKT
NITYKILYNDAVAMTGGQPVDGILSVPRITRQLEAEGVGRMVIVTDEPEKYAEVTDLAPN
VPVRHRDELDAVQRELREIPGTTILIYDQTCATEKRRRRKRGKLADVDRRVFINEAVCEG
CGDCSVQSNCLSVIPVETDFGRKRAIDQSNCNKDFSCLKGFCPSFVTLEGAKLKKGQALA
MDAQDWPPLPEPVLPPTARPYNLLVTGVGGTGVVTLGALIGMAAHLDGKGVSVLDMTGLA
QKYGAVFTHLRFADRPEDIHAARIATGEADAILGGDVVVTAGNEALSKMLEGRTRAVVNC
TETPTAEFTRNPDWQFPLARMQQTVTATVGADHAWFLDAQALATALMGDALYTNMFLLGY
AWQKGLVPVSLPALGRAIELNGTAVAANLQALDWGRRAAVDEARVRQLATPAADTPPPRP
DAALEEVLALREQELTDYQDAALARRYRQRIEALRQAEAPLDPALPVTLAAARNYFKVLA
IKDEYEVARLHTRPEFFARLRQTFAGEPGKDYAVHVHLAPPLWARPDPRSGQIRKRQYGP
WMLGALKLLARLKFLRGTALDVFGHTAERRMERALQAGYEADLERILEALAAGSAHPALL
ELARLPESVRGYGHVKAASAEKARQQRQELLRKLEGGGAAPAV