Protein Info for Dsui_0308 in Dechlorosoma suillum PS

Annotation: Major Facilitator Superfamily transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 441 transmembrane" amino acids 21 to 42 (22 residues), see Phobius details amino acids 52 to 74 (23 residues), see Phobius details amino acids 85 to 105 (21 residues), see Phobius details amino acids 111 to 132 (22 residues), see Phobius details amino acids 145 to 168 (24 residues), see Phobius details amino acids 174 to 192 (19 residues), see Phobius details amino acids 228 to 251 (24 residues), see Phobius details amino acids 263 to 282 (20 residues), see Phobius details amino acids 294 to 313 (20 residues), see Phobius details amino acids 332 to 358 (27 residues), see Phobius details amino acids 373 to 396 (24 residues), see Phobius details amino acids 402 to 425 (24 residues), see Phobius details PF07690: MFS_1" amino acids 19 to 326 (308 residues), 49.1 bits, see alignment E=2.1e-17

Best Hits

KEGG orthology group: None (inferred from 68% identity to avn:Avin_01330)

Predicted SEED Role

"Lysophospholipid transporter LplT / 2-acylglycerophosphoethanolamine acyltransferase (EC 2.3.1.40) / Acyl-[acyl-carrier-protein] synthetase (EC 6.2.1.20)" (EC 2.3.1.40, EC 6.2.1.20)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.3.1.40 or 6.2.1.20

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QND3 at UniProt or InterPro

Protein Sequence (441 amino acids)

>Dsui_0308 Major Facilitator Superfamily transporter (Dechlorosoma suillum PS)
MAGQFGLLRQRRFLPFFGTQFLGAFNDNLFKNALVVLLTFQAASWTALDPGLLANLAAGI
FILPFFLFSASAGQLADKYDKAALARLVKLLEIAIMAVATLGFVLHSLPVLLGALFLLGC
HSTLFGPVKYAILPQHLYPEELVGGNALVEAATFVAILLGTLAGGILAGLGNAPGWISLG
GLVVAVAGYLCSRAIPSAPAPVPGLRLNPNPFTETWRNIGFARQDGRLFLAILAISWFWL
YGALFLAQFPAFAKQVLGGGESTVTLLLATFSVGIGVGSLLCERLSARRLELGLVPLGGL
GLTLFGVAVALVSPAGPAGAPLALGALLASAGLLPVMLALFGIGVFGGLFIVPLYALLQV
RGEPACRARIIAVNNILNALFMVVGSLAAGALLGAGLSIPRLFLLAALLNGVVCIFLCLR
APDFLLACRNWLWRKPGKPSV