Protein Info for Dsui_0173 in Dechlorosoma suillum PS
Annotation: site-specific DNA methylase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
KEGG orthology group: None (inferred from 72% identity to reu:Reut_A2369)Predicted SEED Role
"C-5 cytosine-specific DNA methylase"
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See G8QM77 at UniProt or InterPro
Protein Sequence (602 amino acids)
>Dsui_0173 site-specific DNA methylase (Dechlorosoma suillum PS) MKRDAFTLAPDDVREIRHFHLFCGLGGGAKGFNKASPRVGNMVGKFRCIGGVDVDPAAIR DFQRLTGTPGTVLDLFDRSQYQAFHGMEPPAGWREVGPAEIRAAAGGEYPHIVFLSAPCK GFSGLLSENRSRTDKYQALNRLTLRGIWLMLEAFADEPPELIVFENVPRIANRGRHLLDQ IGDLLQSYGYAVAETTHDCGELGALAQSRKRFLLVARHVAKVQPFLYEPEKKSLAAVGTV LDRMPLPGDPAGGPMHRIPRLQWQTWVRLAFVEAGSDWRSLNRLAVEDGVLRDFLIVPEH FHNGYMGVNRWEDPMGTVRGRSLPLNGAFSVADPRYQGHEYQQYGVRRWEDTCGAVSSQS APGGGAYSVADPRHTGPAKHSNEFRIVPWSEEARAVTGAHGSGQCVADPRRAGEGFGKYM VTGYRQPAGTVISGSTTGQGAYAVADPRPSLERGKGDHYLTGGHYGVAKWEEPSGAVSAA ACHDNGRWSVADPRMPAAADNLVAVIRALDGTWHRPFTTLELAALQSLVDPEEHLELDGL SDSDWRERIGNAVPPDAAQAIAGVMGTTLLLAWSGETFMLSSAPIWVRPVAVALSVAQGG AA