Protein Info for Dsui_0166 in Dechlorosoma suillum PS
Annotation: glutamate 5-kinase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 79% identical to PROB_DECAR: Glutamate 5-kinase (proB) from Dechloromonas aromatica (strain RCB)
KEGG orthology group: K00931, glutamate 5-kinase [EC: 2.7.2.11] (inferred from 81% identity to app:CAP2UW1_0761)Predicted SEED Role
"Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA" in subsystem Proline Synthesis (EC 2.7.2.11)
MetaCyc Pathways
- L-proline biosynthesis I (from L-glutamate) (4/4 steps found)
- L-citrulline biosynthesis (6/8 steps found)
- L-ornithine biosynthesis II (2/3 steps found)
- superpathway of L-citrulline metabolism (8/12 steps found)
- L-Nδ-acetylornithine biosynthesis (4/7 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 2.7.2.11
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Compare to protein structures
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See G8QM70 at UniProt or InterPro
Protein Sequence (377 amino acids)
>Dsui_0166 glutamate 5-kinase (Dechlorosoma suillum PS) MSPTTSRTANAGRLVVKVGSALVTNNGAGLDLAAIHEWARQIAELRHNGKQVVLVSSGAI ACGMQRLGWQKRPKAVHELQAAAAVGQMGLAQVYESAFSAHGLHTAQILLTHDDLADRKR YLNARATLTTLLELGVVPIINENDTVVTDEIKFGDNDTLGALVANLVEADCLIILTDQPG LFTADPRKDPSATLITSARAGDPSLEAMAGGAGTQIGTGGMITKVLAAKRAARSGADTVI ASGREKSPLTRLATGESVGTLLVADTLPMTARKQWLADHLQLAGKLTLDQGAIQALRQGK SLLPVGVREVHGDFERGAAVACLDESGREIARGLCNYGSSEVRLIAKHSSSDIEDILGYM EEPELIHRDNMVCLHEK