Protein Info for Dsui_0104 in Dechlorosoma suillum PS

Annotation: CBS-domain-containing membrane protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 164 transmembrane" amino acids 14 to 37 (24 residues), see Phobius details amino acids 42 to 59 (18 residues), see Phobius details amino acids 68 to 85 (18 residues), see Phobius details amino acids 90 to 108 (19 residues), see Phobius details amino acids 128 to 151 (24 residues), see Phobius details PF04982: HPP" amino acids 44 to 160 (117 residues), 128.8 bits, see alignment E=6.3e-42

Best Hits

KEGG orthology group: None (inferred from 51% identity to gym:GYMC10_2028)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QLJ8 at UniProt or InterPro

Protein Sequence (164 amino acids)

>Dsui_0104 CBS-domain-containing membrane protein (Dechlorosoma suillum PS)
MLPLSAAKAPPAPPLAYIAISMLGAAVAIGSIAGLSLWSGTPWLMAPFGATCVLAFGLPD
SPLAQPRNIVGGHLLATAVGLAVLHTLGDGWLASALAVGLALGLMQWTRTVHAPAGANPL
LVLATKPALGFLFSPVLLGALVIVACALAVNNARQRGSYPKYWY