Protein Info for Dsui_0076 in Dechlorosoma suillum PS

Annotation: acetyltransferase, ribosomal protein N-acetylase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 180 PF13302: Acetyltransf_3" amino acids 11 to 146 (136 residues), 80.9 bits, see alignment E=2.3e-26 PF13420: Acetyltransf_4" amino acids 12 to 164 (153 residues), 33.6 bits, see alignment E=5.8e-12 PF00583: Acetyltransf_1" amino acids 35 to 145 (111 residues), 26.4 bits, see alignment E=1.1e-09

Best Hits

KEGG orthology group: None (inferred from 43% identity to sku:Sulku_0159)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QLH1 at UniProt or InterPro

Protein Sequence (180 amino acids)

>Dsui_0076 acetyltransferase, ribosomal protein N-acetylase (Dechlorosoma suillum PS)
MIYRLGDAYYVRPLREADLDGPYLSWFEDQEVCRYNSHGKYPRNREYFRAFYDSLNGADK
VVWAICHDQDGHIGNISLQGISSINQHAEFAVLLGDRRHWQRGVSRMAGQCLIEHGFNKL
NLVRIFCGTAATNLGMQRLALSLGFREEGRRKAHLYLDGQWVDVIDFGLLRPDVAVQVSI