Protein Info for Dsui_0064 in Dechlorosoma suillum PS

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 579 transmembrane" amino acids 12 to 36 (25 residues), see Phobius details amino acids 42 to 61 (20 residues), see Phobius details amino acids 82 to 102 (21 residues), see Phobius details amino acids 110 to 130 (21 residues), see Phobius details amino acids 138 to 155 (18 residues), see Phobius details amino acids 161 to 178 (18 residues), see Phobius details amino acids 190 to 214 (25 residues), see Phobius details amino acids 233 to 253 (21 residues), see Phobius details amino acids 266 to 282 (17 residues), see Phobius details amino acids 303 to 324 (22 residues), see Phobius details amino acids 336 to 358 (23 residues), see Phobius details amino acids 379 to 397 (19 residues), see Phobius details amino acids 404 to 422 (19 residues), see Phobius details PF19830: DUF6311" amino acids 16 to 318 (303 residues), 200.3 bits, see alignment E=3.2e-63

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QLG0 at UniProt or InterPro

Protein Sequence (579 amino acids)

>Dsui_0064 hypothetical protein (Dechlorosoma suillum PS)
MAMNKQVAITASCWSDTIVAIVIGASAFWLIVGFGVLDTSNILWLTTVSDTTTHYLGWVF
YRNDGWHWPPGLNPNYGLEYSSSVIFSDSIPLVAFVVKLFAGVLPPVFQYSGWWLFLCFI
LQAYFSIRLLRLVSDDPWIVYLGGILFVFSPPMLWRLGGHFSMVAHWLVLIAIYMYFSSA
ERTLAQKCKWALLLACAAVVHTYLFAMILPVWGANVYKRAQAADIRLKEFYPEILVVIGS
ALCALWLAGFFPLRSSYLSGGYGVHRINLLSLFNPHGVASVASDQWSYVLPAVPQGAGDY
EGFNYLGLGGILIFVLAIAPAIKYRRLVLTDVFKPLAIACLLLTVFAITNHLGFGGVSLD
VWLPKFVIKIANVMRASGRFFWPVFYIILLACIWLISKTYPRAVGISILALSAVLQVADT
QAGWRQFHEKFSLNSSVWPQSIYSDERVLSLVSAYPRLRALPAANAIKDWDHLVNLATSV
KIPTDVAYLARANDAAYASRAKEVDELLRSGQRLPEDSVYFLNREFATRVIPTMAAEDRM
FVLSSEVLIYAPAYSAKGLNVSLPVASSLQDLGVVDEKK