Protein Info for Dsui_0046 in Dechlorosoma suillum PS

Annotation: Zn-dependent oligopeptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 693 PF19310: TOP_N" amino acids 32 to 154 (123 residues), 95.5 bits, see alignment E=2.1e-31 PF01432: Peptidase_M3" amino acids 233 to 689 (457 residues), 469.8 bits, see alignment E=1.4e-144

Best Hits

Swiss-Prot: 51% identical to OPDA_HAEIN: Oligopeptidase A (prlC) from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

KEGG orthology group: K01414, oligopeptidase A [EC: 3.4.24.70] (inferred from 75% identity to dar:Daro_3646)

MetaCyc: 53% identical to oligopeptidase A (Escherichia coli K-12 substr. MG1655)
Oligopeptidase A. [EC: 3.4.24.70]

Predicted SEED Role

"Oligopeptidase A (EC 3.4.24.70)" in subsystem Protein degradation (EC 3.4.24.70)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.4.24.70

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QLE2 at UniProt or InterPro

Protein Sequence (693 amino acids)

>Dsui_0046 Zn-dependent oligopeptidase (Dechlorosoma suillum PS)
MSANPLLATVGQPRAVLPPFDRIEPAHVRPAIEQLLADSRALVARLTAAAVPATWDDFAA
PLNDGIEHLSWAWGIVGHLHGVNDVPEWREAYNDLLPEVTRFFSELGQNLALFEKYKALA
ASPEFAGLSPARKRILHNEIRDFRLSGAELPEAQKPRFQAIQEELASLSAKFSENLLDAT
NAFAEFVTDEAELAGLPEDVQAAARAAAERDGKSGEGKAGWKFTLHAPSYMPVMQYAESR
RLRQAMYRAYATRAAEFTDGSSKAEWDNTPLIRRILELRAEEAKMLGFDTFAQVSLVPKM
ADSPEQVLAFLNDLAVKAKPFAEKDLAELKAFAKAELGMDELEPWDIGWASEKLKQARYS
FSDEEVKQYFPEPKVLGGLFKVIESLFNVKLKPDAAPVWHPDVRFFRIETAAGELVGQFY
LDLYARETKRGGAWMDEAITRRATAAGIQTPVAYLNCNFPAPVGNKPATFSHDDVITLFH
ETGHGLHHLLTRVEELGVSGIHGVEWDAVELPSQFMENYCWEWEVLQGMTGHVDSGEPLP
RALYDKMLAAKNFHSGLMTVRQLEFSLFDLRIHHGFDPKGEQTVLDVLNEVRREVAVLIP
PAWHRFPNSFGHIFAGGYAAGYFSYKWAEVLSADVYAAFEEAGNPFDGATGKRFLDEILS
VGGSRPAIDSFKAFRGREPSVDALLRHNGMIPA