Protein Info for CSW01_19085 in Vibrio cholerae E7946 ATCC 55056

Annotation: amidinotransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 326 PF19420: DDAH_eukar" amino acids 33 to 321 (289 residues), 362.3 bits, see alignment E=9.1e-113

Best Hits

KEGG orthology group: None (inferred from 100% identity to vcm:VCM66_A0953)

Predicted SEED Role

"FIG01200127: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (326 amino acids)

>CSW01_19085 amidinotransferase (Vibrio cholerae E7946 ATCC 55056)
MPIMNVHLQPNMLIPRSAAQTARAVVMVPPKEFGFNAQTAQDNAFQNPLALSAETILQRA
MSEFNAMVNGLRQAGVDVVIFDYPLGQGETPDAVFPNNWFSTTEAGELFLFPMACANRRL
EVRPEALIDTLQKQGFAVKKQHSLLAFTEQQAFLESTGVMVMDHPNRTIYAGLSQRCDRE
VLEVYAEQIGYSRVVSFQTRLPSGSPIYHTNVMMAIGEHFCVICDEAIPEYERRFVVKSL
AKDKQVISISIEQMNHFCGNILQLETADGQKVIAMSQSAYEAFTLTQLNQLATHGKLLPF
AVPTIETIGGGSVRCMLAELFLPKQA