Protein Info for CSW01_14745 in Vibrio cholerae E7946 ATCC 55056

Annotation: peptidase M66

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1247 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details PF10462: Peptidase_M66" amino acids 352 to 657 (306 residues), 314.6 bits, see alignment E=6.2e-98 PF12561: TagA" amino acids 686 to 941 (256 residues), 109.1 bits, see alignment E=1.4e-35

Best Hits

KEGG orthology group: None (inferred from 100% identity to vcm:VCM66_A0146)

Predicted SEED Role

"Lipoprotein, ToxR-activated gene, TagA" in subsystem Vibrio pathogenicity island

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1247 amino acids)

>CSW01_14745 peptidase M66 (Vibrio cholerae E7946 ATCC 55056)
MNKKPLTLLIAGLLGSTSAWAQHELTLVQIGEKTVERLESIKAMAERGEGVFERNGERWI
RYKGTDYRLSYKNDLQFPFLPYQGGDDTPYRNVIDFVDQSWEFMMYDGGFYLMSREFGVY
ESDEQGCFIEYIPASHGSKRADGSYIWERDVIYRTETNDCGALVKPEIRSLTVSSLSDVG
VSFDWLGQNETDSVTLTVTNLSDHSDVRRYDHVSAGFFVGGLKPETQYEIALSSCNQVDC
AEPKVVRFTTQEARVGFADEIPTPNHLQGSLEGGLSITQTHTSVAPKGNELTGQGHLDAI
MNREALLLFTPQQGEEINQVRAEVFLDGELVQTTLMLPPSALAASDQPENGRMKVVFSHL
AWSLPLQWDWMKPGLSLRLTDNLGREGVLSQGEIQFGGAPELVIQNIDIGMLMPPRDRNT
MIQNLPTLAADYFQKIPASKLVMADYTPAHFPVVTMPNGVVYTDKSASTGGWHSGDMREA
IGKAMVSTGINNANVGIVSSAGYSQQYNRRFNHITAHTNVGIYTKKDTDLPQVVVHGGSG
GGGIVTLEATTGNEWSHELGHNYGLGHWPYMASIHDLESGWGWDAFHQRFIGNLHWKGDV
YTQQQGDDIVPPFKDAFRFLRDAQNGGEQEYVGTISRFTLEHPAQSRKAQRWMNNGFNLD
SHSPSGYVQWDQETQRYKAVETDTPKPQQVGVPVVTLLGIYDPQNENPSQIYPLVYSNYG
NVFELPQPEQGEYQLEGWQAAGDLTQAEIQYNQWQTLLIDGQQLPICRFDYTNTNGQSAT
FVGSLNAQRNVCEGSRDMRWYNDYQIDSPVGQYELLSQFGAGNVTYTPNAEIGEVQLCTL
NKPHNNGSHDGAGFVRNGRCEQVEGVKNNAEGRVWSYAIRNSEVLSRTLASQRRCELVVE
HRNGSTHIALDGNRHKSTESNKFHVNLSMEKGVPTQVSLSCSDLNGTSTLTRFTPDQNPP
LDKLKGPIIIGQEYGYSQVIDMTKTFAQNQTLLNTDFATIAEFDAFVAEHYGRGVLNNGV
TKAERRAGALYVYPNPETGTRDYFVMRTLEAGAFPTDQTSDQGWKYLGSADDHINFAFNP
IKLNRAEGVSVEARVQSYFGVSRLLTWDERTSTTWDNASNAVFVGQIEGENHYFIQKRPG
EGEAFPTRRASNQDWIWLGSDSSIQETLTELNRDLASFERMLLEWYQQDAMGVWGSDGQR
GNVNDIYQYAFRGGYHYYRLKVTKYGYFPYPTDPNPTNGHWEYLGQF