Protein Info for CCNA_03646 in Caulobacter crescentus NA1000

Annotation: ATPase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 372 PF03969: AFG1_ATPase" amino acids 3 to 369 (367 residues), 515.3 bits, see alignment E=4.3e-159

Best Hits

KEGG orthology group: K06916, (no description) (inferred from 100% identity to ccr:CC_3531)

Predicted SEED Role

"ATPase component BioM of energizing module of biotin ECF transporter" in subsystem Biotin biosynthesis or ECF class transporters

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3CC45 at UniProt or InterPro

Protein Sequence (372 amino acids)

>CCNA_03646 ATPase (Caulobacter crescentus NA1000)
MPTSLRTAYRERLAQGEIRPDVAQAAAVEALSRLEADLDAAGEPGFSFFGRKPKSQRGVY
LWGPVGRGKSMVMDLFFDSAPVAKKRRIHFHAFMAEVHADIDVWRKGDAATRKARFGQSK
GDDPVAPTADRIAGEARLLCFDELQVTDIADAMILGRLFEALFARGVTLVATSNRPPEDL
YKDGLNRQLFLPFIDMLKSALDVVAVRGPVDFRLDRLRAARTWLAPNDKASQAAFDGLWT
DMLDGAPETGATLEVLGRKMRLPRAAGGLVRSSFASLCQQALGPQDYLAIAERFHTLFLE
DVPCLTPARRDAARRFNTLVDALYEADVKLVALAEAEPEQLYPEGEGAFEFERTVSRLQE
MRSADYVGRVRD