Protein Info for CCNA_03620 in Caulobacter crescentus NA1000

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 267 transmembrane" amino acids 29 to 50 (22 residues), see Phobius details amino acids 62 to 82 (21 residues), see Phobius details amino acids 94 to 112 (19 residues), see Phobius details amino acids 132 to 152 (21 residues), see Phobius details amino acids 164 to 181 (18 residues), see Phobius details amino acids 187 to 205 (19 residues), see Phobius details amino acids 217 to 236 (20 residues), see Phobius details amino acids 243 to 248 (6 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccs:CCNA_03620)

Predicted SEED Role

"FIG00482190: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3CDK9 at UniProt or InterPro

Protein Sequence (267 amino acids)

>CCNA_03620 hypothetical protein (Caulobacter crescentus NA1000)
MSDGILSADTRGAKAGRATSPAPARDRAFFRTTITAMAVVIVAGFVLQLAMGRSSFGAPL
VVHLHAVVFMGWVAILVAQAWLAAGGAVKLHRTLGAVAVIWLLAMLVLGPLVTVEAARTG
RVPFFFQPQHFILANTLTLLGAVGLVVAAVALRKNRDWHPRLQIGAFTLLMGPGFGRILP
MPFLKPYAFEIATGVAVIVPLIGMVRDWRVRGRPHPAWLWAIAVLAGTLILARVLAFTPT
GAAIFAAVTAGSPAAHTDGLIYPKPPF