Protein Info for CCNA_03277 in Caulobacter crescentus NA1000

Annotation: glycosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 349 PF20706: GT4-conflict" amino acids 125 to 338 (214 residues), 54 bits, see alignment E=2.8e-18 PF00534: Glycos_transf_1" amino acids 166 to 324 (159 residues), 134.2 bits, see alignment E=7.4e-43 PF13692: Glyco_trans_1_4" amino acids 172 to 310 (139 residues), 119 bits, see alignment E=4e-38 PF13524: Glyco_trans_1_2" amino acids 251 to 339 (89 residues), 49.5 bits, see alignment E=8.3e-17

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccs:CCNA_03277)

Predicted SEED Role

"glycosyl transferase, group 1 family protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3CEG8 at UniProt or InterPro

Protein Sequence (349 amino acids)

>CCNA_03277 glycosyltransferase (Caulobacter crescentus NA1000)
MTTILHAMLGKGLGGLEQVFLDYQPILEAWAARRGGRCVGVVRKGGKMAVAQANRTPPLS
AMPALTDWDPITVGAARALVKTYRPALIFSHGQRPARVFDKAAPADVVRAVCLHKPSFDV
TPGTHYVCVGQHLAALAIERGAPADHVWLVPNAVKPPGVEAQPFAEAGRPIRIVAAGRLH
PKKGFDVLIHAVGKLRAWDYEVTCEIAGEGDERGALEGLIRDLDLEASVTLKGWTGDVAG
FLATGDLFAFPSHQEGFPLTLLEAMAVGLPVVASEIDGPLEILTDGRDGRLVPDNDPDRL
AEALAELISDRETAVRLGAAARQQVLTEYSPQELARRLEAALDGMTSRA