Protein Info for CCNA_03263 in Caulobacter crescentus NA1000

Annotation: TonB-dependent receptor

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 937 signal peptide" amino acids 1 to 30 (30 residues), see Phobius details PF07715: Plug" amino acids 50 to 158 (109 residues), 61 bits, see alignment E=7.5e-21

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccr:CC_3161)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3CCQ2 at UniProt or InterPro

Protein Sequence (937 amino acids)

>CCNA_03263 TonB-dependent receptor (Caulobacter crescentus NA1000)
MSQTLRMRSLLVMGASAVAISGFAVPAFAQQNTTVIEELVVTAQKKEEALQDVPIAVSAF
SQDSLEAQKIDGGPNLQLAIPNVTFAKSNFTNSFNFQIRGIGAKAVGASADQGVGVHMNN
APQQSGNLFEAEFYDVERVEVLRGPQGTLYGRNATGGVVNVITAKPTDMFEANLRAEYGN
YNSMKLRGMLNVPIFGDKLAVRLSGTSLKRDGFVTNTFNGNKVDDRDLYSTRVQVMFNPT
EKLRTNFLWERFHENDSRARTGKQLCTKDNGPATVGGVPTGASRVFLTQGCLSASLYTPA
AYGTVNTSGSLTGLLGNIFGFTSGDVNAGDTTSTNLREIETALDPIYQSKSNTYQFTLNY
DITDELTFTSMTSYGKGDVWTKQDYNRNVATVPFNNTPFTPGGFFTDPQVGRTNKFTTID
VSSGRSEQFSQEFRLQSAFDGPLNFTVGGIHFTYRTLTDYYVIGNSLTLSSLALNFSNTG
NPNCNPATTARCIGIDTSADPTGDGHNYYLNRTPYNLVSDALLGEVYYQVNEDLKFTLGV
RQTRDKKAVKNYSTVLLAPGYGLTLNPTNPDQRARFNETTGRVGVDYKARLGFTDDTLLY
AFYSKGYKGGGINPGVPANSVGIQQTFDPEFVNAIEVGTKNTLLGGSLLLNATAFSYDYQ
GYQISKIVNRTSVNENVDAKVHGFELESIWSPVRNLRLNANIGYLKTKIGDGVSSIDTMN
RTQSNPAYTVVKVGPNASSVGANCVLSTVGVATILGAGAGATLPFACSGAAAYQGFLAAP
AAAGGAGLPAPTAAFLANATGLYTYGAGYSIEGTAANLSGNELPNSPHWTTSVGAQYTFE
LSNGWSATLRGDYYRQSKQYARVYNTAYDQLKSWDNGNITLKVEKPEWGVAIDAYVKNIG
NKTPIVDAYTTDDSSGLFTNVITAEPRLYGIAITKSW