Protein Info for CCNA_03205 in Caulobacter crescentus NA1000

Annotation: M28-family zinc peptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details PF04389: Peptidase_M28" amino acids 299 to 514 (216 residues), 163.1 bits, see alignment E=3.5e-52

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccs:CCNA_03205)

Predicted SEED Role

"Predicted aminopeptidases"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3CE84 at UniProt or InterPro

Protein Sequence (550 amino acids)

>CCNA_03205 M28-family zinc peptidase (Caulobacter crescentus NA1000)
MKRLLLATVLIAAPMLAHASDAPKIDPAKLTAHIKTLSSDAFEGRGPATAGETKTVAYIS
EQMKAVGLEPGGDLKDGKRLWTQDVPLSKFDIDGPVTAHIMVGADHIMLSQGEQVAIRAA
MTHVNAVSIKDAPIVFAGYGVKAPERNWDDFKGMDVKGKVVVVLINDPDFETGSGDFGGK
AMTYYGRWTYKFEEAARLGAAGLLIVHETAPASYGWATVKNSNTNTMFDIVRKDPTKQHP
PMEGWIQRDVAVDLFKKAGLDFEALKKAAQSRDFKPVELKGATFSADYKVKHETIVSKNV
VGKVTGAKRPDETVIFSGHWDHLGVGLPDAKGDKIYNGAVDNATGIAAMLEMGRLAASGP
KPDRSMVFLAVTAEERGLLGSEYYASNPLYPLAKTAGVINTDALDPTGPAKDFTISGNAK
LDLLDDLIAKGKAVGRTYTPDPATEAGYFYRSDHFPFAKRGVPAISFGSGEDLVEGGVAA
GKAASDAYRINAYHQPADEWNDSWRLDGMSADIALVYSVGRDLAGSNRWPEWGEGAEFKA
ARDATKAQRK