Protein Info for CCNA_03113 in Caulobacter crescentus NA1000

Annotation: membrane-associated phospholipid phosphatase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 239 transmembrane" amino acids 12 to 34 (23 residues), see Phobius details amino acids 74 to 98 (25 residues), see Phobius details amino acids 107 to 128 (22 residues), see Phobius details amino acids 148 to 167 (20 residues), see Phobius details amino acids 177 to 199 (23 residues), see Phobius details amino acids 206 to 226 (21 residues), see Phobius details PF01569: PAP2" amino acids 107 to 223 (117 residues), 88.1 bits, see alignment E=2.3e-29

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccs:CCNA_03113)

Predicted SEED Role

"FIG00481037: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3CAS9 at UniProt or InterPro

Protein Sequence (239 amino acids)

>CCNA_03113 membrane-associated phospholipid phosphatase (Caulobacter crescentus NA1000)
MYRLDVRRLFAAAGREIGVASALLIVALGAWGFVGIADEVVEGEAHALDLAVLQALRVGG
QPNALVGPEWLHVAAVDITALGSVAVLTLLILAAFALLGSLKRWTEAWLLALGALSGVTV
SQSLKAVFGRERPDEAYRVVEAVNASFPSGHAMLSAVVFLTLGVLAARFSERRRVKILAV
SAAVVVSLLVGASRVYLGVHWVSDVLAGWSVGAAWAMLCWLVAYLVERRIKPSSASDAT