Protein Info for CCNA_02942 in Caulobacter crescentus NA1000

Annotation: nucleoside-diphosphate-sugar epimerase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 389 PF06258: Mito_fiss_Elm1" amino acids 24 to 332 (309 residues), 359.1 bits, see alignment E=9.4e-112

Best Hits

KEGG orthology group: K07276, hypothetical protein (inferred from 100% identity to ccr:CC_2849)

Predicted SEED Role

"DUF1022 domain-containing protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3CAD1 at UniProt or InterPro

Protein Sequence (389 amino acids)

>CCNA_02942 nucleoside-diphosphate-sugar epimerase (Caulobacter crescentus NA1000)
MTKANPPPSKTSPLKVWAVSDGRAGIEAQVVGLAEAISRLAPCEVTVKRVGWQGNIGRLP
WWLNLLPKRWLTQESGVPDSRNPDDWPDLWIAAGRATLPLSIRAKRWSGGKSFVVQIQDP
RVPPHMFDLVIPPKHDRMSGDNILPITGSPHRVTPQRLAAEYEAFQDLIEPLPRPRVAVL
VGGKSKAFDLSSERAAQIAHSIQIPLEQDGGSLLMTFSRRTPETARALMTARLRHLPGVV
WNGEGPNPYFAFLAAADYILVTEDSTNMATEAASTGKPVFVLKMDGSSLKFRLFHEELER
QGAARPYGGAFHGWTYTPVNETDRAAREVLARIGVEVAQAVAEPEPAPVEKAKAKAKPKP
KARPGAAAKAPTEAAAPKVRKPRAAKAKP