Protein Info for CCNA_02934 in Caulobacter crescentus NA1000

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 233 transmembrane" amino acids 29 to 48 (20 residues), see Phobius details amino acids 75 to 96 (22 residues), see Phobius details amino acids 107 to 128 (22 residues), see Phobius details amino acids 134 to 156 (23 residues), see Phobius details amino acids 168 to 188 (21 residues), see Phobius details amino acids 199 to 216 (18 residues), see Phobius details PF06197: DUF998" amino acids 35 to 214 (180 residues), 70.1 bits, see alignment E=1e-23

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccr:CC_2841)

Predicted SEED Role

"FIG00481601: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3CBV9 at UniProt or InterPro

Protein Sequence (233 amino acids)

>CCNA_02934 hypothetical protein (Caulobacter crescentus NA1000)
MTRRAAEEILPSSLFRDPDTERVTARTGAYLKIGVIAPALMVADVWLAQQLFPGFDAGAQ
FISELGGPEAPMPEIFNYGMVIAGIAGLFAGAGFAHALEHAGGRRVVSAFAGLFVALTGL
GAIFAGIFHWPDPMHRACGVGLGIQFAPLFAAWALWGKPDYRRLAQFSLGWFFGLLLVFA
LLTGVWNVRTGYDVGYWQRGHAFLGLLWLAIAAWTLERGWRAAVMSEIETASA