Protein Info for CCNA_02699 in Caulobacter crescentus NA1000

Annotation: guanine deaminase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 428 TIGR02967: guanine deaminase" amino acids 24 to 422 (399 residues), 599 bits, see alignment E=2.2e-184 PF01979: Amidohydro_1" amino acids 64 to 422 (359 residues), 213.9 bits, see alignment E=3.9e-67 PF07969: Amidohydro_3" amino acids 254 to 385 (132 residues), 52.9 bits, see alignment E=4.6e-18

Best Hits

Swiss-Prot: 56% identical to GUAD_ECOLI: Guanine deaminase (guaD) from Escherichia coli (strain K12)

KEGG orthology group: K01487, guanine deaminase [EC: 3.5.4.3] (inferred from 100% identity to ccs:CCNA_02699)

MetaCyc: 56% identical to guanine deaminase (Escherichia coli K-12 substr. MG1655)
Guanine deaminase. [EC: 3.5.4.3]

Predicted SEED Role

"Guanine deaminase (EC 3.5.4.3)" in subsystem Purine Utilization or Purine conversions (EC 3.5.4.3)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.5.4.3

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3CCV3 at UniProt or InterPro

Protein Sequence (428 amino acids)

>CCNA_02699 guanine deaminase (Caulobacter crescentus NA1000)
MQAFRASILHLLDDPAKAAEGAVAFHEDGLLLVEDGRVIGCGAYAELAPWLGGAELEDLT
GHLITPGFVDTHIHFPQVDVIAAHGKQLLDWLEQHTFPAEAAFADPKHAADTAAFFLDEL
LRNGTTTALVFGSVHKVSVDALFAEAYARDMRLIAGKSLMDRNAPDGLTDTVESSREDMQ
ALIADWHGKGRLGYAVTPRFAISCSDAQLAMAGEILAEHPDVWMQTHLSENLHEIKETAR
LFPKAKDYLDVYDRFGLLRQRSVFAHCVHLKGDAFRRLAAKGGAVAFCPTSNLFLGSGLF
PLEEACSHGVKVGIGTDVGAGTTFSILHTLGEAYKVGQLRGDALDPFQALYLATLGGARA
LDLDDKIGNLAPGKEADFLVLDLAATPLIARRLAGGKSLADKLFALTVLGDDRVVARTYL
AGVERWRR