Protein Info for CCNA_02679 in Caulobacter crescentus NA1000

Annotation: conserved transmembrane protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 transmembrane" amino acids 22 to 40 (19 residues), see Phobius details amino acids 47 to 65 (19 residues), see Phobius details amino acids 86 to 115 (30 residues), see Phobius details amino acids 136 to 160 (25 residues), see Phobius details amino acids 191 to 213 (23 residues), see Phobius details amino acids 219 to 243 (25 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccs:CCNA_02679)

Predicted SEED Role

"FIG00480892: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3CCQ7 at UniProt or InterPro

Protein Sequence (250 amino acids)

>CCNA_02679 conserved transmembrane protein (Caulobacter crescentus NA1000)
MTEGSAGVSATLRTGLSDVGGAVRDCWGALALAAMLSVAASSLPSGARFVIALVAGIVAQ
GALFRRAFGRAAGFKGLRWGRDEWRLLAAQLMILGLFALIGSILLVIVGGVALGVARTAA
PNFDPSTTEAWRAAFAQAGPAGLIVAIVPLASLFILIWLGLRLSLSAPATVDQAGVRVLS
AFSLTRGRTHILLVIGLAISIPVIVLSALLSVAPGQGPVVAAVMAACTYFYAMPAWTGAL
AHFYRHSAAQ