Protein Info for CCNA_02655 in Caulobacter crescentus NA1000

Annotation: NTF2 superfamily protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 174 TIGR02246: conserved hypothetical protein" amino acids 32 to 160 (129 residues), 159.3 bits, see alignment E=2.3e-51 PF13577: SnoaL_4" amino acids 34 to 151 (118 residues), 25.7 bits, see alignment E=2e-09 PF13474: SnoaL_3" amino acids 36 to 155 (120 residues), 31.4 bits, see alignment E=4.1e-11 PF14534: DUF4440" amino acids 36 to 149 (114 residues), 38.2 bits, see alignment E=3.3e-13 PF12680: SnoaL_2" amino acids 40 to 129 (90 residues), 31.1 bits, see alignment E=6.2e-11

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccr:CC_2572)

Predicted SEED Role

"FIG00481376: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3CAB4 at UniProt or InterPro

Protein Sequence (174 amino acids)

>CCNA_02655 NTF2 superfamily protein (Caulobacter crescentus NA1000)
MAGEDADMIDRRTMLMAGGLAMTTTMAKAGEGTDAIQALIQAYFTAWNTNAPERFAEIFW
PDGSWVNVVGMHWRGRDQIVFAHTAFLKTIFKDCKQELVTIEARTIAPGSALAVVTLIQD
AYVTPDGRQMPRAHDRLTLLAVEREGVWRFIHGHNTIVNPDAANNDPVLRMKPA