Protein Info for CCNA_02619 in Caulobacter crescentus NA1000

Annotation: stomatin/prohibitin-related protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 301 transmembrane" amino acids 27 to 46 (20 residues), see Phobius details PF01145: Band_7" amino acids 50 to 257 (208 residues), 91.8 bits, see alignment E=2.7e-30

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccr:CC_2536)

Predicted SEED Role

"putative serine protease"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3CA87 at UniProt or InterPro

Protein Sequence (301 amino acids)

>CCNA_02619 stomatin/prohibitin-related protein (Caulobacter crescentus NA1000)
MPESPFAIPSGNKPPFKSPFQSKGKQAVAISVGVVLLLLSSCVVVTQSSTVEPGNVGVKI
RTLGASAGVDPEPLPARWYLRGIGERIIQYPVIQRTYGYTREADERGNENEEIAFSDNTG
LPMTADISVTLQVNPASAPNLYQTYRLSFDQLLDGPIRNDVRSAVAAEAEKVGVETLYSG
GRQMVIQKAYARVAGKWARHGVNISQLDWIGSIRYPQAIIQQMQAKTQLEQEALAAKALE
AKETALANAAIAKARGEAESIRIKGEALRANPQVLQQLAIEKWNGEMPKVTSGGTPFVKI
D