Protein Info for CCNA_01808 in Caulobacter crescentus NA1000

Annotation: lysophospholipase L2

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 358 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details PF12146: Hydrolase_4" amino acids 72 to 326 (255 residues), 116.6 bits, see alignment E=1.7e-37 PF00561: Abhydrolase_1" amino acids 76 to 325 (250 residues), 55.3 bits, see alignment E=1.2e-18 PF12697: Abhydrolase_6" amino acids 77 to 327 (251 residues), 57 bits, see alignment E=6.6e-19

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccs:CCNA_01808)

Predicted SEED Role

"lysophospholipase L2, putative"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3C897 at UniProt or InterPro

Protein Sequence (358 amino acids)

>CCNA_01808 lysophospholipase L2 (Caulobacter crescentus NA1000)
MRRRLLAAVPAIALSLAVSACGDGASRAPFAESRTPPALTARFYPPQGWAWGYIQSGGGP
VQRYGVAAPPVSPRGTILILTGYGETAEKWFETVSDLTRRGFTVWVLERQGQGGSERLTP
WRDLGHIDSFDPDVAVVKALVNTVIRPKGGTRFVVLGHGEGGLVALRAAQTGLPMDALVL
SSPAFGLSALPRPRSDFARFTPALRTLRLGWVRSSDQRGWRRDGPDGKAAGLTHDADRGK
VQAAWMLANPDLRMGGRSLGWFAAFFDASEAAARDIGKATVPVLMLNAGRDRVVTAKPQT
RLCREMKACREIHYAEGAHDLHMESDAVRVPWLTEVAKLAAPDAPPKPSPTKDQGHGL