Protein Info for CCNA_01797 in Caulobacter crescentus NA1000

Annotation: FtsB-related septum formation initiator

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 signal peptide" amino acids 6 to 6 (1 residues), see Phobius details transmembrane" amino acids 7 to 27 (21 residues), see Phobius details PF04977: DivIC" amino acids 17 to 97 (81 residues), 60.7 bits, see alignment E=4.7e-21

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccs:CCNA_01797)

Predicted SEED Role

"Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3C891 at UniProt or InterPro

Protein Sequence (100 amino acids)

>CCNA_01797 FtsB-related septum formation initiator (Caulobacter crescentus NA1000)
MFARLQPFLPTTAIFFLIFYFAFHALTGDRGLLSISQRNADLAAKTRELRKIRAERMDLE
ARARLLRSGSLSADLLEERARSLLGYADPRDYVIRVKRSR