Protein Info for CCNA_01588 in Caulobacter crescentus NA1000

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 451 transmembrane" amino acids 12 to 34 (23 residues), see Phobius details amino acids 132 to 151 (20 residues), see Phobius details amino acids 183 to 204 (22 residues), see Phobius details amino acids 210 to 230 (21 residues), see Phobius details amino acids 240 to 262 (23 residues), see Phobius details amino acids 423 to 444 (22 residues), see Phobius details PF12040: DUF3526" amino acids 276 to 415 (140 residues), 132 bits, see alignment E=1.3e-42

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccs:CCNA_01588)

Predicted SEED Role

"FIG01209878: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3C9T8 at UniProt or InterPro

Protein Sequence (451 amino acids)

>CCNA_01588 hypothetical protein (Caulobacter crescentus NA1000)
MNALLREARFLLGLKSAVAAMVALFALTAVAVSAGLVEVARQEAAIARIGPQQASDVAAV
TDWVSQGKDPGNAAYYTFHATSDPPSDLAFAAIGTRDVSPYVLRVRALGLEAQLYEGEIG
NPEAALPGRFDFAFVLVYLAPLFVILLFHDLRSGEREAGRLRALEASVGAPSALWGARLT
VRALGLFLALALPFFVGAFVAGTALWKVGAVLAVVLAYLAFWIVLCMVVARAARSSLANA
MTLAAAWMTLTLIVPAIGHVAINSAIPLRQGMELGQTQRTAVHRAWDIPKSESMDAFFRT
HPQWRNTAPLGEAFHWKWYFAFHQVGDELAGDLSRQYRQGVLERAAWSERLGLVTPGVAT
QLALHRLAATDPAAQIAYQDRIRAFHGELRRFYYPYLFEDRPFGRADFARAPEYRAAPAA
GSWPVALLGGVVLMTALVGGIGFLRGRRVAS