Protein Info for CCNA_01158 in Caulobacter crescentus NA1000

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 638 transmembrane" amino acids 12 to 28 (17 residues), see Phobius details amino acids 75 to 104 (30 residues), see Phobius details amino acids 116 to 137 (22 residues), see Phobius details amino acids 166 to 194 (29 residues), see Phobius details amino acids 201 to 221 (21 residues), see Phobius details amino acids 255 to 274 (20 residues), see Phobius details amino acids 281 to 307 (27 residues), see Phobius details amino acids 314 to 331 (18 residues), see Phobius details amino acids 338 to 375 (38 residues), see Phobius details amino acids 384 to 403 (20 residues), see Phobius details amino acids 424 to 444 (21 residues), see Phobius details amino acids 454 to 471 (18 residues), see Phobius details

Best Hits

Predicted SEED Role

"FIG00484025: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3C795 at UniProt or InterPro

Protein Sequence (638 amino acids)

>CCNA_01158 hypothetical protein (Caulobacter crescentus NA1000)
MNRLERFADSRWLGWLAAFGLFLLSRPFPGVHHDGRLYVGDALAKLDPGGVGRDLIFVHD
GQFGFSLYTPVLARLIAMLGVSGATLAIVLVTLLLWFVALALLIERLLADRSQGERWVAL
VFAAILPPLYGAMNVIGFGEPYATPRGLAEAAGLLGMAAYLSGRRVLALGACALGMLFHP
IMGLCAAAAIGLAICLEDRRWFWAGLAALGVLVVAGLFRLPLADRLVTVMDPAWRAIVET
RSPILFPSQWSAETWGRLAVQACTLAAAASLLTGAARRLALGGLAAGLAGVAAAALLADH
VSLLLFLQAQTWRTLQPMAVLATIGLALVCIEAPRKGASGLIGLAFLSIAWMVRGISDLG
LLIAPVGLAFLLLGDRVRLSRPRLYGAIAVGALVVALVGYGALRSYALREALARLPDAWP
FSQGLVWASDLPALLIAGGLSLWMAKAWKAPGRSLRLVGLLVVGLSATLLWDDRSAYIRQ
RDAGRDPTLVSMMASRPGEVLWLAGDVEPWLVAGRASWISKVQSAGVVFSRPLAMALHDR
VARVEAAGLAGPDWIRPLLMDALKPPPPKPEKVRAFCAASDAPAWIVSPLWDGEGVLDAG
LKARVWSPAAPYAEDLSDASGRRWMTAHRYAVIPCRGG