Protein Info for CCNA_01109 in Caulobacter crescentus NA1000

Annotation: conserved hypothetical cytosolic protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 596 signal peptide" amino acids 1 to 27 (27 residues), see Phobius details PF05960: DUF885" amino acids 58 to 577 (520 residues), 517.7 bits, see alignment E=3.6e-159

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccr:CC_1056)

Predicted SEED Role

"FIG00482764: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3C8N6 at UniProt or InterPro

Protein Sequence (596 amino acids)

>CCNA_01109 conserved hypothetical cytosolic protein (Caulobacter crescentus NA1000)
MTQHRTWRAALAGVCLTALVVSSAWAGPSETLTGLVARYEALGNTDGDPDDAGGDSARWR
LPDVSPAADAARLTKLKAISADLSSMDMVGLSEDEKLTRDLLLWAVKDRVEAGGFDEARM
PFSSDGGFDVMMLYRASGMRLKTEAEARRWIALLNRMPAWYAANIANARRGVSTGFVHAV
STAQAVQDRAQRAATTPLAEDPLLAPLRNLPAGMPEATRAALVAEGEKAIKDSVAPARAG
FVKFMAEEYTPRAAKSLAASDLPDGKRYYAFLARRHTTTTLTPDQIHDIGQAEVARIRAR
MQETMKAAGFQGDLPAFIAMLRKEPRFYATSRQQLLEKSSEIAKRADDQLPAHFGVLPRL
PYGVRAVPASIEKGYTTGRYFGGDAKVGRAGGLMINTSELDQRPLYELPALVLHEGAPGH
HIQTALAAEQVNVPEFRKNLYFTAFGEGWGLYSEWLGEGMGIYRDPYELFGRLSYEMWRA
CRLVADTGMHWKGWSIDQARVCFTDNTALSPTNIEVELKRYVSWPGQALAYKIGELKILE
LRKRAETKLGDRFDERGFHDALLLRGSLPLAVLETRIDAWTAQELAKPATAAKKKD