Protein Info for CCNA_00925 in Caulobacter crescentus NA1000

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 180 transmembrane" amino acids 21 to 41 (21 residues), see Phobius details amino acids 53 to 75 (23 residues), see Phobius details amino acids 87 to 106 (20 residues), see Phobius details amino acids 112 to 130 (19 residues), see Phobius details amino acids 136 to 154 (19 residues), see Phobius details amino acids 160 to 178 (19 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccr:CC_0881)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3C6N9 at UniProt or InterPro

Protein Sequence (180 amino acids)

>CCNA_00925 hypothetical protein (Caulobacter crescentus NA1000)
MQFDPEQARKDIETATLRARAFQAYAAAGPVIAVWGLVWIVTNLAKVLATSQAAVIGSAA
MLVGIAASIAGGLLARRSSRPRPPLKSALGGATFAGLLVAVLAVAGPADMQAASAVVGLI
VAAAYVFVGLMTGARIAWLGLALGLVVLAAWFGARPAFDLILALAGGGLLAGTGLWLWRQ