Protein Info for CCNA_00612 in Caulobacter crescentus NA1000

Annotation: L-asparaginase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 294 PF01112: Asparaginase_2" amino acids 7 to 285 (279 residues), 254.3 bits, see alignment E=7.8e-80

Best Hits

KEGG orthology group: K13051, beta-aspartyl-peptidase (threonine type) [EC: 3.4.19.5] (inferred from 100% identity to ccr:CC_0576)

Predicted SEED Role

"L-asparaginase (EC 3.5.1.1)" in subsystem Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis (EC 3.5.1.1)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.4.19.5, 3.5.1.1

Use Curated BLAST to search for 3.4.19.5 or 3.5.1.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3C7D4 at UniProt or InterPro

Protein Sequence (294 amino acids)

>CCNA_00612 L-asparaginase (Caulobacter crescentus NA1000)
MTDVPYVIALHGGAGVIPGRDYGRALDHLRDLAARMSSKLADGLDAIDAVEIAVTEMEDS
GLYVAGRGSAPNAVGVVEMDASIMDGARHRAGAVCAIQGVASPVGAARQVLEATPHVLLA
GEGASQFARARGLPLIGDPANFYRTPVGLTQADIDAEAAALAHGTVGAVALDRRGALAAA
TSTGGVFGKRPGRVGDTPLPGAGVWADGEVAVSCTGVGEYFILGATAYDVAARLRYAGQS
LDQACQGAIARIGELGGDGGLIAVDRRGRVSFQFNSPGLKRAVAGCGRLTQALI