Protein Info for CCNA_00591 in Caulobacter crescentus NA1000

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 687 PF17990: LodA_N" amino acids 9 to 312 (304 residues), 181.4 bits, see alignment E=2.5e-57 PF18417: LodA_C" amino acids 428 to 577 (150 residues), 131 bits, see alignment E=3.1e-42

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccs:CCNA_00591)

Predicted SEED Role

"Lysine-epsilon oxidase (EC 1.4.3.20) antimicrobial protein LodA" (EC 1.4.3.20)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.4.3.20

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3C436 at UniProt or InterPro

Protein Sequence (687 amino acids)

>CCNA_00591 hypothetical protein (Caulobacter crescentus NA1000)
MANPVFRVHPAIGIARVGNSEEFYLGPETMAGLPVGPSVDTGGRDLDGGLPIRAGTESTI
ISSDELRDSAGRMKRQAARFRIYHYPDQTGGKERYPCGQGEEIVIGSVVGGRTVTDIVWT
VHLANKKANSYMLNDMLGMQVYDKAHASDLHLRNAAEGDDLNNAARLRRLVIDAGPRAIR
GAEAKAVRFDKATIASHATLDAAIETLPHYPKTFPDDSFARMYTPTGGIETLGELRTDQH
GRLLVLPAWGRAAGWLQADGTPFPLVGGLIAPGEYGDVNADGWFDDTGDGPVSARICFDD
GAVVEAAQAWAITTDPSYAPQTLNVISLWDDMYDTWVRKLDLVPDLFDHRFNTEFAPLFD
DHLKPIFRAPALQRWNTNLPSRAIAAHDAVAAIAAGDKPGDTIMTGLAYVRDPNNPEQTN
IGAPFMPLSMGDAGKAFLTVTRTQYFFLEQWDQGRFKPDATLTFGPGEALDRIVLVNCLG
GRFAPGIEATFVMRDPSIYQADWETSGGGPFRLRARRLDYSQVQASQPFLTVGYIPMHPG
PDGIRPAPMEPGDVTKFMAVPWHTDYNACATHNSAPNPTNSTALYWSWPAQRPVQVHVAS
DVHNGKLGPQRYSVRGPGTTSDDLGETGRFQDLVDIVRYWHRIGFIVQGTAIDGDEHYDR
EMFLEVQGQLDAPEITPWPMNSLTPSS