Protein Info for CCNA_00580 in Caulobacter crescentus NA1000

Annotation: AAA ATPase domain protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1027 transmembrane" amino acids 875 to 892 (18 residues), see Phobius details amino acids 1005 to 1018 (14 residues), see Phobius details PF13191: AAA_16" amino acids 193 to 363 (171 residues), 46.8 bits, see alignment E=4.9e-16

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccs:CCNA_00580)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3C522 at UniProt or InterPro

Protein Sequence (1027 amino acids)

>CCNA_00580 AAA ATPase domain protein (Caulobacter crescentus NA1000)
MSETPLPDLDVGSPSLTGMKAEAEGLITLARRYAALSGPFAPVEALRAAGAVEPIDLAIT
VSSALDAVCDVSATGQWLLRASERAWDLKRLNDEGSLRKAIGWRRDLGADPATADLLDAL
LGKGAFSPKAMARMLERIEAQEAAAGPELRRLATALEWSGALAPAAALLARLQAALNRTD
QARRGELLLADGFQGREQAVETLTDWIRNPDQDPIRVRALYVSGLPAIGKSTLLEHVLRQ
VAQQGVETVVVRLDFDRASLDVLDQLGLSVEVARQVASQLPSAAADLRQARLEAITTTQE
IRLKGGGRSGIPYALIQALGVQLQSAGRRLVMVLDTLEVLRGRGETHPRQLFDWLDQLAR
AVLVPLVVVAAGRGRALEPVADRVAETLNLDRLTDAEAERLLSAADVPPALWTQVIALAE
GDPLQLRLLATLARDEGQAGLTGKGGATITLYRSLEARLGGRHAKLARFIPLFRRFNSEL
LGAVMAPVVLGERLSPGAAAALWAELKDQTWLIAGETEGWLTPQPDLRRRLAGKLYDEHA
RRTGALHRRAARWFAERPELWAGAESLYHRLQATRWAGPDALKGMNLAAGVAFQSADLEE
LPEAARDALLRARGERSYEGRGDALTPSGEVSPAAADELRMLISKGDLAEASHFYGRVFR
PAALDPTSPTADVALTLLWRTGRWTEARRLAAERAWTLPWDHALFDTWPEATLVRLEMQA
EFNFADLQGWFRQDGEDRPARAARLIRTSRNHLGFGALAFALDPDRLFGDRANPPAAVLA
MWTPDAPQEGLTRALATAHERRQRIAGGGGSSLAAPSRPDDARTLAILSPYGDLAEGLLP
RDREGGLLRLLRHQLAALPEAASGRLDGANPASALSALGFTAEWLSAAGLLLRDPDLRLI
GRSAERWRAAAAGRWRYARRSPGWRGAPTRLDVVIEDRLTALFEAPSPIDAARAQLASWA
GDEAGVARVLRSAKLDAVRAELAKQPVEAPREAASRAAWQLLRRWIPAAFVPPLAILAIE
PEGMLRS