Protein Info for CCNA_00490 in Caulobacter crescentus NA1000

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 294 transmembrane" amino acids 34 to 57 (24 residues), see Phobius details amino acids 68 to 88 (21 residues), see Phobius details amino acids 96 to 115 (20 residues), see Phobius details amino acids 127 to 150 (24 residues), see Phobius details amino acids 161 to 179 (19 residues), see Phobius details amino acids 187 to 206 (20 residues), see Phobius details amino acids 218 to 242 (25 residues), see Phobius details amino acids 260 to 283 (24 residues), see Phobius details PF05675: DUF817" amino acids 33 to 269 (237 residues), 351.2 bits, see alignment E=1.6e-109

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccr:CC_0458)

Predicted SEED Role

"FIG00482572: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3C3V2 at UniProt or InterPro

Protein Sequence (294 amino acids)

>CCNA_00490 hypothetical protein (Caulobacter crescentus NA1000)
MNLKDRIKAGVATLDERARPWARKSRWNGYAYEFLLFGLKQAWACLFGGLMLALLVGTKL
FWPEAAPIARYDFLVVAAIAIQASLLALKLERWDEALVIFMFHVVGTIMELFKTAHGSWI
YPEDSVLRIGGVPLFTGFMYACVGSYIARIWRLFDITFIRYPPFWTTHILAVLIYANFFT
HHYMIDIRVGLFALSVLLFGRTWFVFTPDQTARRMPMLMGAVLVSLFIWFAENLGTFAGA
WIYPNQADGWQMVPFEKMGAWYLLMLISFVLVTLVHPPVHACVARIRQGIWRAA