Protein Info for CCNA_00422 in Caulobacter crescentus NA1000

Annotation: SDR pteridine reductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details PF08659: KR" amino acids 5 to 124 (120 residues), 26.7 bits, see alignment E=7.4e-10 PF00106: adh_short" amino acids 6 to 189 (184 residues), 112.3 bits, see alignment E=3.1e-36 PF13561: adh_short_C2" amino acids 11 to 239 (229 residues), 118.8 bits, see alignment E=4.5e-38

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccr:CC_0417)

MetaCyc: 49% identical to dihydropterin reductase monomer (Agrobacterium fabrum C58)
RXN-23857 [EC: 1.5.1.50]; 1.5.1.50 [EC: 1.5.1.50]; Pteridine reductase. [EC: 1.5.1.50, 1.5.1.33]

Predicted SEED Role

"FolM Alternative dihydrofolate reductase 1" in subsystem Folate Biosynthesis

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.5.1.33 or 1.5.1.50

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3C5D6 at UniProt or InterPro

Protein Sequence (250 amino acids)

>CCNA_00422 SDR pteridine reductase (Caulobacter crescentus NA1000)
MTSRGAALVTGAGRRIGQVLALEAARAGYDVAIHYRASADEAEETARAVRDLDRRALLVR
ADLSDEDETRSLVAQAAPLGPLTLLINNASAFEDDRVGGLSRASWDRHLETNLRAPIVLA
EAMAAALPADRQGLVVNLIDQRVWRPNPQFFSYTLSKAGLWWATQTLAQALAPRIRVNAI
GPGPTLPSVHQAPGEFEAEAAGVLLQRRASPEEVAAALRYLIDASSVTGQMIAVDGGQHL
GWKTPDIVAP