Protein Info for CCNA_00361 in Caulobacter crescentus NA1000

Annotation: hot dog superfamily thioesterase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 315 PF13279: 4HBT_2" amino acids 17 to 131 (115 residues), 70.1 bits, see alignment E=1.2e-23 amino acids 182 to 305 (124 residues), 52 bits, see alignment E=4.9e-18

Best Hits

KEGG orthology group: K07107, acyl-CoA thioester hydrolase [EC: 3.1.2.-] (inferred from 100% identity to ccs:CCNA_00361)

Predicted SEED Role

"FIG00482433: hypothetical protein"

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.1.2.-

Use Curated BLAST to search for 3.1.2.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3C3E4 at UniProt or InterPro

Protein Sequence (315 amino acids)

>CCNA_00361 hot dog superfamily thioesterase (Caulobacter crescentus NA1000)
MTTAQPLPGVEIWRGGVNTWDCDEMGHMNVRHYVVRAQEGLIGMAAELGLPHAFSPHANA
TLLVKEQHIRFLREAHAGAPLYMLGGVIEMGETEARILQLLIHPTSGELAATFQTTVVHA
TPRDGQPFPWPRIARERAEALKVEIPERAQARSIDLSPFTPTASLARAEALNLSRIGLGG
LLPSDCDVFGRMRTEQFIGRVSDGIGTFIHPFRDLVVEHADQKPQRMGGAVLEYRIVHLA
WPRAGDRIEIRSGLLGTDARTMRIVHWMLDPATGEPWGTSEAVAITFDLDARKVVPVTDA
ARAALAAHEVSGLAL