Protein Info for CCNA_00080 in Caulobacter crescentus NA1000

Annotation: LexA-related transcriptional repressor

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 213 PF00717: Peptidase_S24" amino acids 91 to 209 (119 residues), 63 bits, see alignment E=2.1e-21

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccr:CC_0082)

Predicted SEED Role

"Phage repressor"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3C567 at UniProt or InterPro

Protein Sequence (213 amino acids)

>CCNA_00080 LexA-related transcriptional repressor (Caulobacter crescentus NA1000)
MATLSHGEIWRAIDALAERFDMTPSAMARMAGLDPTSFNRSKRGSAETGHARWPSTESLS
KLLEATGVNFSEFAALTERSPVRAPGRRGAPLIDLAQAGKDGFFDEAGMPVGAGWDEAPA
PDLGEGLFALEVTGDDLAPVYRDGDRLLVSPTLEPRKGDRVVTRTHGGEVLVRELGRVTA
RSIELLALDRVSGERLLSRDEVAWIARIVWVSQ