Protein Info for CA265_RS25120 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: aminopeptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 482 signal peptide" amino acids 1 to 19 (19 residues), see Phobius details PF02225: PA" amino acids 121 to 220 (100 residues), 43.6 bits, see alignment E=4e-15 PF04389: Peptidase_M28" amino acids 246 to 438 (193 residues), 113.8 bits, see alignment E=1.3e-36

Best Hits

KEGG orthology group: None (inferred from 51% identity to mtt:Ftrac_0677)

Predicted SEED Role

"peptidase M28"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9ZBW8 at UniProt or InterPro

Protein Sequence (482 amino acids)

>CA265_RS25120 aminopeptidase (Pedobacter sp. GW460-11-11-14-LB5)
MKYLFSAALLCTALFANAQDKFGDVFAKINTDVQQNSKAYQTLKYETETIGHRLTGSANG
AKAEQYAFDLLKSYGCEVKFQPFEVESWARKTISVEIGQDKNSLTKMKAVTLAHSPVSAD
VTGDIVDAGNGLEADYQASPEKFKGKIALIYLGVLPGSPAGTKSLHRSEKTAIATKYGAI
GVIIINTVKGGVLLTGTASVTGKLISIPAICIGLEDGMALREKIKSQPQIAHIAMTNFSG
LIKARNVVATFKGTELPKDKIVVGGHLDSWDLSTGAIDNGIGSFAIMDMARTFKKLNLKT
KRTVEFVLFMGEEQGLLGSKAYIDQAKKDKTLNQVKFMLNYDMTNDPKGFSTSRAEMKEL
FSAWGADIVKIDTGFKNMFNAGAGLHSDHQPFMLEGIPTGGGFGGKLPNNSGPFYHSDGD
SFKLVDEQELKNTVRYSAMLTYALANTPKIPVGVQGEEELRTFLESQNLKEPLSIAGEWR
WK