Protein Info for CA265_RS24055 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: GNAT family N-acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 179 PF13302: Acetyltransf_3" amino acids 15 to 146 (132 residues), 67.3 bits, see alignment E=2.3e-22 PF00583: Acetyltransf_1" amino acids 43 to 145 (103 residues), 38.3 bits, see alignment E=1.5e-13

Best Hits

KEGG orthology group: None (inferred from 58% identity to cpi:Cpin_2638)

Predicted SEED Role

"GCN5-related N-acetyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9ZBC7 at UniProt or InterPro

Protein Sequence (179 amino acids)

>CA265_RS24055 GNAT family N-acetyltransferase (Pedobacter sp. GW460-11-11-14-LB5)
MNFDLQPTLANDLITIAPLKEEDFEALFAVASDPLIWEQHPNKDRYKRAVFENFFKGAIE
SKGAFIVYEKETNKVVGSSRYYELDETDYSVAVGYTFIAREFWGKGHNKALKALMLDYAF
QFVDKVILHIGATNFRSQKATEKLGAVKIAELEVAYYGEPLKWNFVYQIDKDKWVNKAS