Protein Info for CA265_RS22500 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: DUF58 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 448 transmembrane" amino acids 18 to 38 (21 residues), see Phobius details amino acids 44 to 61 (18 residues), see Phobius details PF01882: DUF58" amino acids 204 to 288 (85 residues), 79.2 bits, see alignment E=1.1e-26

Best Hits

KEGG orthology group: None (inferred from 62% identity to phe:Phep_0238)

Predicted SEED Role

"Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9ZAG6 at UniProt or InterPro

Protein Sequence (448 amino acids)

>CA265_RS22500 DUF58 domain-containing protein (Pedobacter sp. GW460-11-11-14-LB5)
MKKFFQQYYTNLFLTDRLFAALGCCIVLFLLKFFFAWLGDIPEIATGAVLVLFFIDIFML
YRNNQGIAAKRITSKRLSNGDENPIQIEIRNSYGFGVNARVIDEVPFQFQLRDKDFKLHL
KSAEVKSIHYNLRPTKRGEYDFGFIRAYISSPLGLISRRYNFDGAKILPVYPSFINLGQY
ELLAASRYLTEFGIKKIRKVGQSSEFDQIKNYVGGDDIRTINWKATARKGSLMVNTYTDE
KSQNIYCVIDKSRVMRMPFEGLSLLDYAINATVALSKVAMLKEDKAGLITISENIGSIVT
ADRKASQLGSIMNVLYKEKTRYLESNLEALYSAVRSVVKQRGLLVFFTNFESLSALQRQL
PYLKRIAKYHLLVVVFFENTELKELSTEPAKDVEGIYHKTIAEKFIYEKKLMVKELNKHG
ILAILTPPQKLTVNVINQYLALKAQQRI