Protein Info for CA265_RS21815 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: molecular chaperone GroES

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 25 50 75 96 PF00166: Cpn10" amino acids 12 to 95 (84 residues), 96.4 bits, see alignment E=4.3e-32

Best Hits

Swiss-Prot: 58% identical to CH10_CHLP8: 10 kDa chaperonin (groS) from Chlorobaculum parvum (strain NCIB 8327)

KEGG orthology group: K04078, chaperonin GroES (inferred from 86% identity to phe:Phep_0244)

Predicted SEED Role

"Heat shock protein 60 family co-chaperone GroES" in subsystem GroEL GroES

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9ZA55 at UniProt or InterPro

Protein Sequence (96 amino acids)

>CA265_RS21815 molecular chaperone GroES (Pedobacter sp. GW460-11-11-14-LB5)
MALNLKPIAGSSNRVIVEPAAAEEKTASGLYIPDTAKEKPSKGTVVSVSEEDAEGKKASV
KVGDVVIYGKYGGTEFPYEGKDYLIMRETDIYAVVG