Protein Info for CA265_RS19770 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: peptidase M1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 836 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details PF17900: Peptidase_M1_N" amino acids 49 to 238 (190 residues), 80 bits, see alignment E=3.8e-26 PF01433: Peptidase_M1" amino acids 276 to 482 (207 residues), 140.5 bits, see alignment E=9.2e-45 PF13646: HEAT_2" amino acids 608 to 688 (81 residues), 30.3 bits, see alignment E=6.2e-11

Best Hits

KEGG orthology group: K01256, aminopeptidase N [EC: 3.4.11.2] (inferred from 56% identity to cpi:Cpin_1418)

Predicted SEED Role

"aminopeptidase"

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.4.11.2

Use Curated BLAST to search for 3.4.11.2

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9Z9C7 at UniProt or InterPro

Protein Sequence (836 amino acids)

>CA265_RS19770 peptidase M1 (Pedobacter sp. GW460-11-11-14-LB5)
MNKRIIACGVLLASAFMANPLFAQEQPVEKSNNLNIYRVTATKVNDLVHTKLDVSFDYAK
RYLHGKEWLTLKPHFYATDSLTLDAQGMDIKTVALVGAKGNTPLKYVYHDNKLYITLNKK
YTNTEKYTVYIAYTAKPDELKVKGSAAITDAKGLYFINPDGTDKNKPTQIWTQGETESSS
AWFPTIDKPDQKTTEEISITVKSKYTTLSNGKLVSQKANADGTRTDTWKMDLPHSPYLFM
MAVGEFKVTKDTYKGKEVSYYLEPKFAPYAKQIFGKTPDMIQFYSNLLGVDYPWNKYAQV
VARDYVSGAMENTTATLHGEQVQKTDRELLDENEEGTIAHELFHQWFGDYVTAESWSNLT
MNESFATFGEVIWHGHDEGQDAEDKSRYSKLQSYLGSTKNGESPVLARFHYGDKEDMFDN
VSYSKGSIILYALKNQMGDAAFYKSLNRYLTTNALKNGETHQLRLAMEEVTGKDWSPYFN
QWYYNGGHPVLSIDYGYENGKATIKVKQTQDASVQIFTLPIKVDIYAGGKKIRKEILINS
REQNFSFEVSAKPDLIDFDADKILVGETNDNKTAENYYFQYKNAPSYANRIEALQFIMQS
KAKSGQLVLLEGLKDKSADLRALSIDGINLADAQIKAAALPILLQIAKTDKNTEVRAAAI
VKLAETGDQAYKTLVLASLKDRSYKVIAAGVDGLSKLAPQESIAAVALLDEDTKAHIAPS
IALLYINEPKDEYQAFYDNVMLTGDKNKVFAVVGQYFQYLRANNNPVVTEKGIMNISSAI
ERLKLQSYLNKQLAGAYAAAAQAKTQQAAAVSGEAKANLSKQAELFKKGAADLEKE