Protein Info for CA265_RS18130 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: gliding motility-associated lipoprotein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 441 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details PF03781: FGE-sulfatase" amino acids 43 to 431 (389 residues), 150.9 bits, see alignment E=2.8e-48

Best Hits

KEGG orthology group: None (inferred from 51% identity to psn:Pedsa_2522)

Predicted SEED Role

"GldJ"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9ZCY1 at UniProt or InterPro

Protein Sequence (441 amino acids)

>CA265_RS18130 gliding motility-associated lipoprotein (Pedobacter sp. GW460-11-11-14-LB5)
MKKIYLLAIVGITVMLASCGHGGQGELVGAYNRKFKNDRIPLGMVYVPPGHTPLGGSDED
ITFSQNGPSKMVTISAFFMDQTEISNAEYRQFTNWVRDSIAIAMMGNPQQFMITPRGNAA
AAVGGEKYIDWKKVGPNGANIWRNKGRGAAAAQVSQLDGMYYSGLDALPGKKELDVRKFE
YSYAELNMEKAAIGHKDPNSKRQDYIDRYTVAIYPDTMVWKTDYSYSQNDPMVRGYYNHP
SYDDYPVVGVSWEQAKAFSHWRTRLYDGVATARKLPVGSRSDYRLPAETEFEYAARGGNT
KTKYPWGGPYIRNTKGCLQANFKPGRGDYSSDGGIYTVGVRSYFPNDYGLYNMAGNVSEW
TLTAYNKGASPLLHDLNPNFTYDAGATDSKYKKRKVVKGGSWKDTGYFLQNAVATYEYQD
TQRSYIGFRCVSSYPGTDLRH