Protein Info for CA265_RS16315 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: peptidase M16

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 950 977 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details PF00675: Peptidase_M16" amino acids 57 to 108 (52 residues), 36.8 bits, see alignment 3.7e-13 amino acids 151 to 217 (67 residues), 22.6 bits, see alignment 9e-09 PF05193: Peptidase_M16_C" amino acids 263 to 431 (169 residues), 65.6 bits, see alignment E=5.5e-22 amino acids 758 to 869 (112 residues), 33.1 bits, see alignment E=5.2e-12

Best Hits

KEGG orthology group: None (inferred from 72% identity to phe:Phep_3516)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9Z8G2 at UniProt or InterPro

Protein Sequence (977 amino acids)

>CA265_RS16315 peptidase M16 (Pedobacter sp. GW460-11-11-14-LB5)
MKFKLFTLACFLITGSLAKAQTTYQWKTGTSGGFAYKYVTNDPTKTRFYTLKNGLTVILS
QNNKEPNITYKMAVRAGSNTDPRTNTGLAHYLEHLLFKGTDKFGTLNYAKEKPLLDKIEA
LYETYNKTTDPAKRKEIYKEIDKTSGEASSYSIANEYDKMMKSIGSNSTNAHTSVEETVY
EEDLPSNAIDKFLAVQAERFRAPVFRIFHTELEAVYEEKNIGMDNDGRKMYEKMLYALFP
THNYGQQTTIGTIEHLKNPSLIEIRKYYNKYYVPNNMALIMSGDINYDDLIKKIDKDFAY
MVPKPFSLYNPAPEKPLTQVQTVDIYGPSAENLYVAYRGFAQNTHQSLLLDLIGSILANG
KAGLMDININKQQKMLRASAGYNSMKDYGIFILSGSPKAGQSLEDAQKLLLEQVELLKKG
EFDESLIKATVSNIKLAELQSFDNNDVRADFAMNAFIQNRGTEWDKTLASTDAMAKVTKK
EIVDFANKFFINNYVSILKHKGEDKSIIKVEKPAITAVKTNVNEVSPFTKNIIAAPVKPI
APKFLDYTKDLNFGKAGIADVIAVQNTENGIFRMSYRFDMGSYNYKLLPYAAQYLAFLST
DKYSAEDISKAFYNIACSYSINVGTDVTTVSISGLQENFDKAVALVEDVLAHCKPNEKAL
EDLKGRLLKSRDNAKLNKSSILGGLMSYAQYGADNPFNYGLTNDEIKNMKSADLIYILHN
LTNYKHTITYYGPKTLTAFSADIVKAHPLAKEFNDAAPIKKFVYTKTDSNKVYFADYDMV
QAEIRWVRNAGLYDPANAAKIALFNNYFGGGMGSVVFQTIRESKALAYSTFAVYSSPNTK
EKENTIIAYVGTQADKMNEAVAGMNELLTTLPESDKSFALSKTNSLNGMETSRITKDGII
YTYLADKKLGFDHDSRVDEYANLKPLTFNDVKSFHQTNLSGKPYSYCIVASEKKINMADL
AKFGPVTKLSLEQIFGY