Protein Info for CA265_RS10575 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 885 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details PF13620: CarboxypepD_reg" amino acids 23 to 97 (75 residues), 37.9 bits, see alignment E=9.6e-14

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9Z4A6 at UniProt or InterPro

Protein Sequence (885 amino acids)

>CA265_RS10575 hypothetical protein (Pedobacter sp. GW460-11-11-14-LB5)
MRNYAIMLLFLLTAFSALAQKPIKGLVKDHNGKAIESVNVSLKDAEGNIINFTRTNRNGE
FNIPLKNDQIAGYKIEASSIGYKKLSTVVTDVNKSYDLVLQHSETTLETVTVKNRPSLTA
NGDTLNYRPSDFADKQDRSIGDVLKKMPGIEVAENGKISYNGKSISNLYVDGDNLLDDKY
NIGTKSIPQSAVDKVQVIQNDQPIKMMRKNNMSDDVALNLVIKDDAKLKVMGDATVGAGM
PNRFDENLTAMLFNKKLKFINNIKGNNIGNDPGIDLTSHNLSDYLKRLDNDKPSGLLSTG
AAGVPSLPQSRYLFNKAGLINLNNLYKFNQDLQLRANLSYLYDQRDQQYNKFSETYLSGQ
TISYSESQNNVINPQKLRTQFNLNGNADKYYLNNNFVLDYAPYKSASGFVINNLAANQVL
RQETLDISNEFNYRKKLKSEDVINLYSYLNRTTQPETLNITPGLNADILNNGNSYLGLSQ
YIKIPTWYTNNYASFAFVKNNFVQTYKAGFNIQQQQLNSELYRIQNNQQTELSANAVNDL
DWLKTKLYADATYEFTNDKLKAGLSLPLSYNQINYSDELNQLDKSLHKLFLNPSLNVKYQ
TSTENYVTANYAFRNDLGGIDDVYRGTVLKNYRSLFANNAPISESKTHNVGAGFNFRKAM
QMLFINLTANYSDAELNTISSYSLSNNIQQRVVLPLSNHIRTLSFSANASKYLFDLRSTV
SAGLSFSQSRYDQLQNNELFAFNAQTISYKVGIEAKLASFINWSYLANFAVTDNKAKVAN
AIKTNFQQLRQQSTLAITTVRNVYLNLSAEHLFTHQSTQPNLKYLFADMNIKYKYLKMKT
DLEFGITNLANIKRFDAIYLSANSLTTGTYNIPGRVAMLKATFNF