Protein Info for CA265_RS07430 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 925 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details PF13620: CarboxypepD_reg" amino acids 24 to 106 (83 residues), 35.2 bits, see alignment E=2e-12 PF13715: CarbopepD_reg_2" amino acids 25 to 118 (94 residues), 34.2 bits, see alignment E=3.2e-12 PF14905: OMP_b-brl_3" amino acids 460 to 913 (454 residues), 128.2 bits, see alignment E=6.7e-41

Best Hits

KEGG orthology group: None (inferred from 53% identity to phe:Phep_2584)

Predicted SEED Role

"FIG00908344: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9Z2N4 at UniProt or InterPro

Protein Sequence (925 amino acids)

>CA265_RS07430 hypothetical protein (Pedobacter sp. GW460-11-11-14-LB5)
MLKQLFSALIFSLLFLPALAQNASIKGVVVDTVEKTKLQNSAILLISSKDSILIKDARTK
ANGAFEFSNLKKGNYTLVVTFPKMADYIRDIQLSDSSKFNLGNIAMDSKATLLNEVVIKA
QKQAISMKGDTITYQADSFAVKPHANLQDLLRRLPGIEVDKDGAIKAGGKDVNTLLVDGE
EFFGDDPLLAQKYLKANAVSEVQVYDKKTKEEELSGIKEGDAKEKVMNIKLKENAKNGYL
STLDANSDLKHYKNIGGMAGIYKNKLKAAVFGSNSNTNQDSKASAAMSKLKGNDYDVIEV
GDDGSTVMISYGGSRDEDDFSPSSGLPDVTGYGAHFSDKWNENKIGLKLNYKVSERNILD
RTTYKNQSLLPNGTNFFSEGRSNSETRNTGQSLKGSVDVKIDSLSTLKISFAGSKRKNSS
QYISTNETKNDAGIFVNNSDQFNDSNGDNDLFNGNINYSKKFVKKGRTLSIDIQPETKSS
TSLGTSLSVTNYTDGSGTINRTVNQNFLNDNSGTESSLGTRISYTEPLGKQFSLQTAYSF
KTVASNSHKLVFDKSLNNKRIDSLSNNFDFNNFSNIGKVVLQYRSKKFTLSGGAEATETT
FELNDLDRNNKFNRNYLNWAPQSNFNYKLGKSTSVSLSYNGNTRQPSLDQLQPIRQINNP
LYEIRGNPDLKPSFNNNFGFNFNIYQQKSQMYAYVYGGYSFTKNAVVSTRTVDEVNKTIS
SYINLDGNNNFYGGASFNKSFSKIHFNTGFNASFNHSTSVSILNNKLNENVNNSLSFRPR
FSYYDNKVQLQYNPSFTFSNSRSSIGSINNGKSFIHNHDISGNIQLPYNTEFNTSISLSY
QPANSSFSTPVNIALWNAYLSKKMLKSQELEVKVSISDILAEKIGYNRYVGGNSISEYTN
SFIPRYVLIGVTYNLTGNFIKQDKK