Protein Info for CA265_RS05590 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: alpha/beta hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 349 signal peptide" amino acids 1 to 34 (34 residues), see Phobius details PF00561: Abhydrolase_1" amino acids 77 to 207 (131 residues), 83.7 bits, see alignment E=2.5e-27 PF12697: Abhydrolase_6" amino acids 78 to 341 (264 residues), 49.4 bits, see alignment E=1.4e-16 PF12146: Hydrolase_4" amino acids 78 to 191 (114 residues), 30.1 bits, see alignment E=4.5e-11

Best Hits

KEGG orthology group: None (inferred from 68% identity to bpy:Bphyt_6173)

Predicted SEED Role

"Epoxide hydrolase (EC 3.3.2.9)" (EC 3.3.2.9)

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.3.2.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9Z2B6 at UniProt or InterPro

Protein Sequence (349 amino acids)

>CA265_RS05590 alpha/beta hydrolase (Pedobacter sp. GW460-11-11-14-LB5)
MENQNNYSRRRFLSVAALTVAVAELGGLNLLNAQENVKKTSGNPTSHSNASFDAIKQIQA
GVLNMAYAESGPADGEPVILLHGWPYTIHSYADVAALLSAKGYRVIVPHLRGHGNTQFLS
AKTPRNGQQSAIAADIIAFMDALKIDKAIIGGFDWGARTANIMAALWPERCKAMVSVSGY
LIGSQEVNQKPLSPKAELSWWYQFYFATERGRLGYEANRKDFAKLIWQSASPEWKFTDAI
FEKSAVELDNPDHVAIVIHNYRWRLGLAEGEAQYDKYEKILATFPVITVPTITLEGDANG
APHGNPANYAAKFTGKYAHHNLDGGIGHNLPQEAPQAFADAIIQAAMMA